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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6033860 chr20:1448575 A/G FKBP1AP1 chr19:58337829-58338146:- 0.37 6.25 9.1E-10 Box Plot
THCA rs60341692 chr8:11791672 C/G SGK223 chr8:8175258-8244008:- -0.47 -8.68 6.07E-17 Box Plot
THCA rs603462 chr11:77577864 G/T INTS4L1 chr7:64601603-64694600:+ 0.42 7.63 1.32E-13 Box Plot
THCA rs60356521 chr14:66725519 T/C ATP6V1D chr14:67761088-67826982:- 0.31 6.36 4.84E-10 Box Plot
THCA rs60364191 chr8:10327069 C/G SGK223 chr8:8175258-8244008:- 0.4 7.25 1.7E-12 Box Plot
THCA rs603672 chr11:49234566 T/A FOLH1B chr11:89372395-89431886:+ 0.37 6.37 4.33E-10 Box Plot
THCA rs60379971 chr14:39978057 G/GA LOC647288 chr13:75811890-75814517:- 0.39 7.05 6.32E-12 Box Plot
THCA rs6041497 chr20:1314265 A/G FKBP1AP1 chr19:58337829-58338146:- 0.42 7.74 6.17E-14 Box Plot
THCA rs6041508 chr20:1316641 C/T FKBP1AP1 chr19:58337829-58338146:- 0.43 7.86 2.55E-14 Box Plot
THCA rs6041576 chr20:1323934 T/C FKBP1AP1 chr19:58337829-58338146:- 0.49 8.73 4.4E-17 Box Plot
THCA rs6041577 chr20:1323935 T/A FKBP1AP1 chr19:58337829-58338146:- 0.49 8.86 1.57E-17 Box Plot
THCA rs6041586 chr20:1325720 A/G FKBP1AP1 chr19:58337829-58338146:- 0.41 7.1 4.5E-12 Box Plot
THCA rs6041703 chr20:1341197 C/A FKBP1AP1 chr19:58337829-58338146:- 0.38 6.19 1.31E-9 Box Plot
THCA rs6041884 chr20:1364598 A/G FKBP1AP1 chr19:58337829-58338146:- 0.64 10.76 2.6E-24 Box Plot
THCA rs60422275 chr22:24049577 G/A IGLL3 chr22:25713888-25716191:+ 0.6 9.01 4.91E-18 Box Plot